The Charles Darwin Research Station is located in the small town of Puerto Ayora on the island of Santa Cruz in the Galapagos Islands. Both a historical and natural treasure, the Galapagos Islands is one of the most influential places to science, helping to revolutionize scientific thought through the idea of evolution. For 3 months I will be interning at the station working to put a geographic perspective on thousands of recorded data that date back to the days of Darwin himself.
Tuesday, July 24, 2012
Staying idle isn't my thing...
I signed up for my PADI open water scuba certification last night...It was on a whim that a Good Earth tea quote inspired. It's a 3 day course with an introductory dive, then 4 dives on two different islands. I start not this weekend but the following weekend, going Friday, Saturday, Sunday. Early birthday present to myself and I CANNOT WAIT!!!!!!!!
Thursday, July 19, 2012
The goldfish grows to the size of the bowl in which you put it in

(-.40972, -90.708) a format more conducive to mapping in ESRI and Quantum. This is usually done manually with a formula that looks a like this.
D + M/60 + S/3600
Manually works great when only doing a few points, but we are tasked with over 5000 which would not only take a large amount of our time, would be painfully mind numbing work. I believe this would be quite a simple task if given the extension licenses in ArcGIS by calculating normalized fields. But we are going the route of doing it within Excel first hand then adding our file to ArcMap to map it. Our excel sheet by the way is of course highly disorganized... The person who entered the information randomly chose to use super case zeros in combination with the (°) symbol
as well as using double apostrophes instead of quotation marks (i.e '' " <---look very much the same huh?) So we first used find and replace to change all of the values to the same format. As I was working a code to write a formula in Excel Chema goes Rocky double fist pose in the air and says "I got it!" The guy knows his stuff because he worked out a solution in open office by writing a formula that identifies the location of the number then divides where it needs to and does that for each part of the DMS format.
It took me awhile for him to explain what it was and what it was doing but it's a great way to learn new solutions to old problems. The actual formula is below and saved so in case we need to do this again.
This scenario is also a great example of bringing new solutions to old problems can get things done highly efficiently. Henri thought this would take up to a week or more which would of consumed all of our time in the process. It was done in little under 3 hours...NEXT task.
10lb binoculars from back when they were doing military operations in the Galapagos |
I've also recently watched the movie Big Fish. Great movie, check it out.
The greatest part of large challenges is that they tend to reap the greatest rewards : )
Saturday, July 14, 2012
Maybe I'm Amazed
Friday 7/13/2012
Today started out great, except the fact we woke up without running water. However, I finished up with the basic Quantum workshop. Frank had mentioned that Google was offering a developer grant which after looking into doesn't apply to Ecuador for some reason. He did however mention that the station has direct contact to Google and could possibly take that route for help. He rattled off a bunch of goals that he felt should be addressed and I added in some geospatial aspects to those problems that could ultimately create a better system for the station overall. This however is going to be quite the task because we are going to start meeting in order to create a proposal to Google stating our objectives and ways about efficiently dealing with those tasks. The underlying goal is to get them excited to get involved. It's cool to see that whether it be myself personally writing this or our group of GIS people collectively that people are more than willing to help as long as you can state your intentions.
That took up most of my morning all while Chema was chatting with a granted over marine biologist. I asked them what they had been doing all morning and she explained they had lost a $3500 tracking device that they had placed on what I think she said was Oahu? At any rate, there not cheap. It sends out a highly inaccurate GPS point when it believes it has a clear signal. The last point sent out was at 7am this morning on the south western side of this island, past Tortuga Bay to the north. Their plan was to go and try to find it...I said Chema, you have to get me on that boat with you. So by 2:00 I was on that boat. We rallied 7 people including two National Park people, and 5 of us from the station all huddled in this dinky fiberglass hull, half inflatable, zodiac with a 50hp motor. What seems like small swells from shore were no longer small swells in a 12 foot boat. We were bouncing around, getting that flight or fight reflex as we try not to be the one to go overboard. As we near the GPS location, which did happen to be in the water this morning, we realize that this is going to be extremely challenging. The device is about the size and also looks like a car cell phone charger which is conveniently colored blackish grey...the same color as every rock on this island. It also, if floating, doesn't float upright so it will also be half submerged. We park our zodiac in this small cove while dozens of the largest marine iguanas I've seen to date here, stare at us like we've just arrived on another planet. We start our search and continue our search until 4:30pm where we assume we've had enough for the day. Although we couldn't find the device, it was pretty neat to sift through the piles of debris that get washed up during high tides. Of the how ever many tourists come here, it looked as though about half have lost just one of their flip flops which have now taken residence in this very spot for the next million years.

Back to the boat, back to the dock, and off to the fish market to get dinner. I stopped and got two pounds of fresh Oahu fillets to cook Chema, and Joe. Then of course since I was in town I stopped by the bakery, this time getting what look like strawberry buns mhmmm I am excited for those. The fish we cooked up looked 5 star restaurant material....here me out...We sauteed a sauce of aja pepper seasoning, yellow pepper, onion, and garlic until it was caramelized. Then dropped in the fillets turning them accordingly. While cooking rice with squeezed orange juice and pepper. The fillets were complemented by a yellow pepper/green pepper salad with oregano. Rachel, all of this I'm making for youu when I get home by the way. We had it all made and eaten in less than 45 min. From there Deb came back with our care packages from home. Thanks family I now have more candy than I can possibly eat! Other than that I am now off to skype it up with Rach and go to bed : )
Today started out great, except the fact we woke up without running water. However, I finished up with the basic Quantum workshop. Frank had mentioned that Google was offering a developer grant which after looking into doesn't apply to Ecuador for some reason. He did however mention that the station has direct contact to Google and could possibly take that route for help. He rattled off a bunch of goals that he felt should be addressed and I added in some geospatial aspects to those problems that could ultimately create a better system for the station overall. This however is going to be quite the task because we are going to start meeting in order to create a proposal to Google stating our objectives and ways about efficiently dealing with those tasks. The underlying goal is to get them excited to get involved. It's cool to see that whether it be myself personally writing this or our group of GIS people collectively that people are more than willing to help as long as you can state your intentions.
Thursday, July 12, 2012
MAPHEAD

To start out he addresses that maps don't always have to depict data or have to show the route of a physical world. He highlights allegorical maps that illustrate things like emotions or in the example below the idea of success.
Later on he also poses an interesting question...
For a long time I blamed writers like John Bunyon and Dante for this allegorical form of cartacaoethes. Desperate to extract a storyline from a possibly dreary and didactic subject - the struggle to a life worthy of heaven - they seized on a quest narrative, a "pilgrim's process," and mapmakers were quick to follow suit. I wonder: how would history be different if Bunyan or Dante had chosen to represent life not as a linear journey through a geographic territory but as something a little more holistic - a library, say? or a buffet? What would Western civilization be like in that alternate universe? Would we value different things, set different goals for ourselves, if the governing geographic metaphor of our culture were replaced by something else - recipes instead of maps, cookbooks instead of atlases? Would shallow celebrities still tell interviewers they were "in a good place right now"? Or Would they say things like "I'm at the waffle bar right now, Oprah"?
*copied from chapter two
![]() |
The Road To Success |
Sunday, July 8, 2012
gahhhh
The agave plant...the source of tequila |
Today I woke up pretty slow from the night before but I
made it to the market by 9am to grab a bunch of fresh vegetables. I found a papaya the size of a watermelon that was calling my name as well as a mini
pineapple. Love fresh fruit. Other than that I got the bare essentials including peppers, onions,
and pears as well as a bunch of cheese empanadas. Afterwards we summoned enough energy to head over to Las Greitas for
the rest of the day. It was much
different than when we were there last time because of the tides going on right
now. It was about 6 feet lower than normal and clear as day or as Joe put it
"I can see clearer underwater than above water.” On top of being crystal
clear you can see down the 45 some feet just as clearly. We swam around then
did some climbs. If you climb up 20 feet in this one section then another 15
from that it comes to a cave that then goes back until you can’t see the light
of day anymore. From here there’s no other way to get down but to jump back
into the water. Same place as one of the earlier videos I posted.
flower off of an exotic lilypad |
GAHHHHH, soon enoughh : )
Drive all night...
From a work side of things and those of you wondering what my work has been consisting of...
Chema found out how to upload raster's to postGIS. He taught me then we've been working to get this system down. This post is more so we remember what we have to do to upload more in the future. It may seem like a foreign language but dozens of big time satellite imagery companies and countries are storing their massive databases within the very same system.

The goal is to get this file which is the Northern tip of Isabela taken from the Landsat Satellite and part of a larger file that contains all of the Archipelago.
Step 1: Open Command Line and type d: to navigate to the D drive (or whatever drive your file is located in)
Step 2: Type (>cd_BORRADOR) to change the directory to the folder (borrador) containing our Galapagos.tif
Step 3: Type the following command including spaces to use the raster2 tool within postGIS to create an sql file of our original file. SQL is short for standard query language and are encoded to be read by large scale databases such as PostgreSQL the backbone of postGIS.
Step 4: Hit enter, and it creates your .sql file
Step 5: Type the following command based on....(-U=Your user, -d=your database within postGIS, and -f= execute or add the following file). Prompted for a password enter the password for your registered user access.
Chema found out how to upload raster's to postGIS. He taught me then we've been working to get this system down. This post is more so we remember what we have to do to upload more in the future. It may seem like a foreign language but dozens of big time satellite imagery companies and countries are storing their massive databases within the very same system.

The goal is to get this file which is the Northern tip of Isabela taken from the Landsat Satellite and part of a larger file that contains all of the Archipelago.
Step 1: Open Command Line and type d: to navigate to the D drive (or whatever drive your file is located in)
Step 2: Type (>cd_BORRADOR) to change the directory to the folder (borrador) containing our Galapagos.tif
Step 3: Type the following command including spaces to use the raster2 tool within postGIS to create an sql file of our original file. SQL is short for standard query language and are encoded to be read by large scale databases such as PostgreSQL the backbone of postGIS.
Step 4: Hit enter, and it creates your .sql file
Step 5: Type the following command based on....(-U=Your user, -d=your database within postGIS, and -f= execute or add the following file). Prompted for a password enter the password for your registered user access.
Step 6: From here you can open pgADminIII and wallah, your raster has been added to your database. If you want to visualize it in Quantum you'll have to make sure you have the postGIS raster plug-in downloaded and enabled and you can do what you want with it from there.
On top of that I've been making a bunch of maps for Henri's other paper on invasive snail distribution throughout Santa Cruz.
Monday, July 2, 2012
Orange Sky
We grabbed a cab ourselves and Marcel our driver had a lead foot to get there. We didn't think Deb's group had even came because there was no one in sight along the 3 mile dirt road we were crusing along. Before allowing our day turn into another Los Gemelos day, we asked him to wait but instead of being a bum in the car he wanted to come with for a hike. He later proved the fact you can hike in mud with dress up loafers on...This place was like some Garden of Eden place with passion fruit growing along the trail as well as invasive, yet yummy orange/limes. We didn't expect to see much because the forest was extremely thick. Now I can see how the Chiliean guy got lost for 6 days about a two weeks ago. As the trails opened up we started stumbling upon massive tortoises. These had to of weighed over 450 pounds. As we pass by them at a respectable distance they were not to fond of our visit. As they compress their lungs to fit in their heaping shells they make this extremely distinct noise that I swear producers mimicked for the role of Darth Vader. They sound like their about to chase you and rip your head off but 450 pounds of intimidation is all talk. We ended up hiking through the thick of it past tortoises, through giant mud holes, over bogs, and the whole works. Not quite what we expected but thats the fun part.

Afterwards Marcel had no problem with us sitting in the back of his truck. So as we are driving through this grown over tree tunnel as were picking limes from over hanging trees...epic moment. Then we came upon some random lady who was picking oranges, she insisted we each pay three dollars for looking at the tortoises...Definitely a scam but we didn't argue to cause an issue and she ended up giving us 15 oranges which was probably worth the money anyways.
Didn't do too much else except watch community for a few hours to feel normal again. Then went over to kioskos to grab some grub.
Sunday funday consisted of a whole lot of relaxation. It was heavily based on episodes of community and eating chocolate buns. Our internet and electricity have been shotty lately...not sure why but the whole towns electricity went out on Saturday mid-convo with Rach. Not cool. and then both the stations and what im now calling internet cafe #1 didn't work either...so again this place has a case of the hiccups. But Sunday night turned out good it was great chatting with Rachel. big day. I'll leave it with that. Sadly, I was sleeping by the time a man in his 70's should be in bed...
Back at work here I am anticipating some things from Henry tomorrow. He said he has alot of maps to be made which would be great. On top of that Chema and myself were asked to create a workshop for other people at the station on the freeware GIS program QuantumGIS.
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